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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797008.1_cds_XP_016452700.1_4641
CDS Infomation

[gene=LOC107777223] [db_xref=GeneID:107777223] [protein=probable zinc metalloprotease EGY2, chloroplastic isoform X2] [protein_id=XP_016452700.1] [location=join(25051..25202,25386..25452,28909..28998,29125..29211,30052..30102,30238..30348,30610..30684,30771..30876,31007..31100,32040..32193,33852..34059,34188..34348,34471..34719)] [gbkey=CDS]
Sequence

ATGAACATGCCGGCGGTTTGTCGTGTTAGTATTCTTTCCGTGTCACCACAGTGTAGTTCG
TGCTGTTACAATCGGCTCCAGCCTTTGCTTTCTTCCCCGTCAGCTGGTCCTCTGAAACAT
AGTATTAATTTTCCTACTAGAAACTCCTTAAGATTTGTCGCTCGCAATAAAGGAAGCTTT
CTTTGCAGATCGACTGAACCGGATAAAAGTGACGACAAGGATGAAAATTTGGACAAGGAA
GCGGATGGGGTAAATCTGAATGACTCTGTAGCAGATAAGAGTCTTGAGCTGAACTCTCGA
ACTGATCAGGACAAGGATCAAACAATGGGGATGTTGGAGAATCCAAGTCTAGAAAATAAT
AATGGAGCTCAAGTGAATGAACAGCCTCGAGTTGAGGATGGTACTGAGGTTCAAGTTGCG
AGTGGATCACCTCTTCCAGGTGTGAAGCCTCTGCAACTTGATGAATCAACCAGGATTCCC
AAGGAAACAATTGAAATTCTCAGAAATCAAGTTTTTGGTTTTGACACCTTTTTTGTTACA
AGCCAGGAGCCATATGAGGGTGGAGTATTATTTAAAGGGAATTTACGAGGACAGGCTGCA
ACAGCTTATGAAAAAGTATCAAAGAGAATGCAGGACAGACTTGGAGATGTATATAAACTT
TTTCTTTTAAACAATCCAGAGGATGATAAGCCTGTGGCAGTTGTGGTCCCAAGAATGACC
CTGCAACCTGAAACTACAGCTGTTCCAGAATGGTTTGCAGCGGGGGCCTTTGGACTCGTT
ACAGTATTCACTTTACTTCTTCGCAATGTGCCGGCTTTACAATCGAACTTGTTATCAGTT
GTTGACAATCTTGACCTGTTGAAGGATGGATTACCTGGAGCTCTCATAACTGCCTTTGTT
CTGGGGGTTCATGAAGTTAGCCATCTTTTAGTTGCCAAAGAGGTTGGCGTTAAGCTCGGC
GTTCCATATTTTGTTCCTAGTTGGCAGATAGGCTCCTTTGGTGCTATAACAAGGATTGTA
AATATTGTACCAGAGCGTGAAGATCTCTTGAAAGTTGCAGCAGCTGGACCATTAGCTGGG
TTCTCGGTGGGCCTTATTCTTTTGCTTTCAGGATTCATCTTACCACCTACTGATGGCATT
GGCATCATCGTCGATCCCTCTGTGTTCCACGAATCATTTCTAGCTGGCGGTATAGCCAAG
CTTCTTCTAGGAGATGCTCTCAAGGAAGGAACTCCTATATCAGTAAATCCGCTTGTCATA
TGGGCCTGGGCTGGACTTCTCATTAATGCTATCAATAGTATTCCTGCAGGAGAGCTCGAT
GGTGGCCGGATTGCCTTTGCCATGTGGGGTAGAAAGGCTTCAGCTCGCCTCAGTTCGTTA
TCTATTGGGCTTCTCGGGATATCTGCATTGTTTAGCGATGTAGCATTCTATTGGGTAGTG
CTAATATTCTTCCTCCAAAGAGGGCCTATCTCTCCACTATCAGAAGAAATCACTGATCCT
GACAATAAATACATAGCCCTTGGAGTTGTAGTTCTGCTCTTGGGCCTGTTGGTTTGCCTG
CCATATCCCTTTCTCTTCTCTAATGAAGCTGCCACTGGTTTCTAG

Peptide Sequence

PEP ID

XP_016452700.1
PEP Infomation

PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MNMPAVCRVSILSVSPQCSSCCYNRLQPLLSSPSAGPLKHSINFPTRNSLRFVARNKGSF
LCRSTEPDKSDDKDENLDKEADGVNLNDSVADKSLELNSRTDQDKDQTMGMLENPSLENN
NGAQVNEQPRVEDGTEVQVASGSPLPGVKPLQLDESTRIPKETIEILRNQVFGFDTFFVT
SQEPYEGGVLFKGNLRGQAATAYEKVSKRMQDRLGDVYKLFLLNNPEDDKPVAVVVPRMT
LQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSVVDNLDLLKDGLPGALITAFV
LGVHEVSHLLVAKEVGVKLGVPYFVPSWQIGSFGAITRIVNIVPEREDLLKVAAAGPLAG
FSVGLILLLSGFILPPTDGIGIIVDPSVFHESFLAGGIAKLLLGDALKEGTPISVNPLVI
WAWAGLLINAINSIPAGELDGGRIAFAMWGRKASARLSSLSIGLLGISALFSDVAFYWVV
LIFFLQRGPISPLSEEITDPDNKYIALGVVVLLLGLLVCLPYPFLFSNEAATGF

Transcript Sequence

Gene sequence data has not been registered.